BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021E06LP1|AL427773
(958 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1575 1866 0.0
>3x_Contig1575
Length = 11952
Score = 1866 bits (940), Expect = 0.0
Identities = 949/952 (99%), Gaps = 1/952 (0%)
Strand = Plus / Plus
Query: 1 attgtcgctggtcaaaccaaaccaaaaytttcccaaactagctagttagaactcagataa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5291 attgtcgctggtcaaaccaaaccaaaactttcccaaactagctagttagaactcagataa 5350
Query: 61 gtatgtgtcaacaaactaccagtatcttttgaagcaggacttcagaaaagagagtaccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5351 gtatgtgtcaacaaactaccagtatcttttgaagcaggacttcagaaaagagagtaccaa 5410
Query: 121 ctcacagttgtatgaagaatcgaaagggaatttattgccacgtgacaggaattaagagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5411 ctcacagttgtatgaagaatcgaaagggaatttattgccacgtgacaggaattaagagac 5470
Query: 181 cgccttccctaagaaaccctctaactttgcctcctttccaatctgattgatcgtttctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5471 cgccttccctaagaaaccctctaactttgcctcctttccaatctgattgatcgtttctat 5530
Query: 241 caaacttatctacgaggtttacaatatagcttagatggcattatttcttgctgtttctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5531 caaacttatctacgaggtttacaatatagcttagatggcattatttcttgctgtttctct 5590
Query: 301 atatttcatggaattcgtcttttagccgccaattccatctaaattgaaggatatggcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5591 atatttcatggaattcgtcttttagccgccaattccatctaaattgaaggatatggcaga 5650
Query: 361 tttaccctaccctcttttctgtgggacttgaatatgattttttctttgaaaagaatcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5651 tttaccctaccctcttttctgtgggacttgaatatgattttttctttgaaaagaatcagt 5710
Query: 421 tggttagggtaaaacattaaaaaaaaaaaaaatggaactttttcagtatggcaaaatatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5711 tggttagggtaaaacattaaaaaaaaaaaaaatggaactttttcagtatggcaaaatatg 5770
Query: 481 cctacgcaaagtatagagtataatttttgttggattttggcctctatgctaatattctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5771 cctacgcaaagtatagagtataatttttgttggattttggcctctatgctaatattctga 5830
Query: 541 aatcttcaactttttttttttttggattttacctatactgacgcgtactatgaaatgcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5831 aatcttcaactttttttttttttggattttacctatactgacgcgtactatgaaatgcgt 5890
Query: 601 gggactgagaaccggcctggattgttttctatgttggcaaaaccagtttcaaactttacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5891 gggactgagaaccggcctggattgttttctatgttggcaaaaccagtttcaaactttacg 5950
Query: 661 gtaggacagctaaagctttgatgtaaaattgttgatagaaacgaaaaaataaaagctttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5951 gtaggacagctaaagctttgatgtaaaattgttgatagaaacgaaaaaataaaagctttg 6010
Query: 721 ttctctatacttgacctttctctcctgattccatttatgatcgacatttccataccttgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6011 ttctctatacttgacctttctctcctgattccatttatgatcgacatttccataccttgc 6070
Query: 781 aatacttattatcgtgatttactaacagtgtaattgttctcattcctaaacaggtacaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6071 aatacttattatcgtgatttactaacagtgtaattgttctcattcctaaacaggtacaaa 6130
Query: 841 ccgtatcttttatttcagattttttgtacccttacagctacctcctttattcaatttaag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6131 ccgtatcttttatttcagattttttgtacccttacagctacctcctttattcaatttaag 6190
Query: 901 gtagaacacagagttcacaaattcagagttag-acacttttttcccattycc 951
|||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 6191 gtagaacacagagttcacaaattcagagttagaacacttttttcccatttcc 6242
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,249
Number of Sequences: 1807
Number of extensions: 24249
Number of successful extensions: 532
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)